That Chemist - 2022-05-25
In this video, I discuss the best way to dry THF, toluene, DCM, MeCN, methanol, ethanol, HMPA, DMF, DMSO, acetone, benzene, and 1,4-dioxane. https://www.patreon.com/thatchemist Community Discord - https://discord.gg/QWNPETtPcZ ---------------------------------------------------------------------------------------------------------------------------------- Links to articles discussed in this episode: newest paper - https://www.doi.org/10.1021/jo101589h https://www.doi.org/10.1021/jo00414a038 https://www.doi.org/10.1021/jo00438a024 ----------------------------------------------------------------------------------------------------------------------------------
Molecular sieves are really amazing, I've had some very sensitive chemistry become frustrating when inhibited by the smallest traces of water. It doesn't matter if you use bone dry solvents or practice good technique, if its not working, its probably your reagents. Eventually, I dried EACH reagent specifically, dissolving them in reaction solvent to sit over sieves for a few days...and then combining them via cannula, and that went from 0% conversion to 100% conversion!
awesome!
That's very interesting, may I ask what type of reaction were you doing?
@@Spoooky738 it was a copper catalyzed trifluoromethylthiolation, the active species being a copper(I) SCF3 with a bipyridine or phenanthroline ligand
@@moosehead4497I must be getting better at reading chemistry because I actually got some of that. Happy day!
Someone writing his habilitation had a funny story last week:
The paper stated, that he has to do a reaction with THF and water added separately
Didn't work
Turns out the problem was, he thought the autors used dry THF, whereas the reaction needed (in addition to the added water) more water, which was already present in their poorly dried THF
Didn't see too dry THF before, I think this is funny
Hey I just wanted to say thank you for this channel. I ended up mastering out of my PhD program two years in because I just couldn't do it and never had any success with any project. I'm probably not cut out for research and am still looking for a different avenue in chemistry, but your videos are a nice reminder of the good aspects I remember from being in lab.
Come and do bio.
This video puts me in mind of my PhD days back in the mid 2000s; when one of us used a mechanical press to divide sodium chunks into wire, the other one would HOLD a 5 litre flask by hand underneath to collect said wire. After that, we simply threw in a load of lovely THF and indicator into the flask. God, how I miss those highly dangerous, potentially fire-inducing times!
5 liter flask full of air, sodium metal and nice wet THF what could possibly go wrong 😲 Glad you made it keeping all 10 fingers eyes and ears. 🤓❤
This is the kind of content most YouTube chemist's omit. It's really helpful in improving practice.
Thanks! (Also I love KSP)
I feel so much more confident in my undergrad labs with your videos. These insights are so helpful!!
Glad to hear it :)
Awesome video. Tried to ask my Orgo 2 Prof about this once and got a vague answer. Not his fault, it's not like he could talk for 11 mins on it. But I'm glad to get the full answer here.
it takes humility to admit the limits of your own knowledge
What sounds to you like a vague answer can often involve an internal conversation like this:
- This person is curious, and I love that, so I want to help
- But this is a really complicated subject
- And I don't want to steer this person wrong
- Oh, and there's that one common thing that would otherwise make this suggestion go really badly wrong, so I can't just say that
- That meeting I have to attend is in six minutes, and I'd love not to arrive sweating from running to it, and even that wouldn't be enough time
@@davidfetter That mostly sums up why I put that sentence about 'not his fault' in there (I added that just before posting). You can explain a lot more in detail with a video/presentation than an off the cuff response to a question.
The way we used to activate mol sieves (sensitive organometallic chem) was as follows: hang them on your schlenk line, pull max vacuum and blast with a heatgun. As you drive off the water you'll see a very small increase in pressure. Our pressure meters went down to 1x10^-3 mbar and would usually rise to 5-8x10^-3 mbar while drying the sieves. Keep blasting until the pressure stays at a constant minimum.
Doing it this way you avoid using arbitrary time limits and can judge the progress with a measurement.
Negative: it's slow as hell because you're heating something inside a vacuum.
It would be easy and might make that process faster to use a heat lamp to heat the sieves.
a sand bath?
I've effectively used anhydrous potassium carbonate to lower the water content of alcohols. Ethanol in particular was a great success, obtaining 98-98.5% ethanol after treatment. After decanting, I simply heated the residue in an oven to restore the potassium carbonate to an anhydrous state, regenerating the starting drying agent. I then used the magnesium method to lower the water content some more. But the molecular sieves have so much drying power, they're easy to manage, and reactivation after use is just one more little lab chore, no big deal.
Speaking of, I also would have made it my own business to ensure everyone was up to speed on the whole "shorting out the heating element" thing. Six errors is no longer a mistake.
I have an e-copy of the Purifications text you recommended, for sure useful to have around. Good presentation, thanks for sharing.
Potassium carbonate is an excellent desiccant, it's far better than magnesium sulfate, at least for quick drying solvent after an aqueous workup. It also has the benefit of presenting as dense granules, rather then the magnesium sulfate powder, which means you could even get away with just decanting instead of filtering.. I always use it when I am extracting a freebase amine, as well as other compounds that is not sensitive to alkali.
@@moosehead4497 I agree. The actual physical presentation of the drying agent after its use is very helpful for removing it. It tends to clump together and is very, very easy to decant. I've never had an issue with needing to separate any layers; simply decant the dried alcohol into its own container. Repeat the treatment if necessary (like I said, it usually got to 98% first try).
Our lab usually dries solvent by stirring with CaH for 30 mins over CaCl2 tube, then distill and proceed to add them into activated 3A molecular sieves. But for reactions that need to be very very dry, we have THF dispenser that is dried through a special column which was cool.
Yup that is the best way to get your THF bone dry. THF soaks up lots of water and it sorta sticks to it like flypaper.
Glad this topic got picked! I don't ever need "analytically dry", but "pretty dry" solvents can be useful for predictable paint and finish. The residues in wal-mart grade 91% iso also seem to be mostly aqueous and I think getting some of the water out makes it a bit cleaner although I haven't actually studied it other than "oh that looks a little bit cleaner with the dryer stuff".
The hardest working YouTuber since Justin Hawkins Rides Again. Top banana!
Not even a chemist, but i really enjoy these videos.
Generally what we do for sieves is just heat them at 300 C for 12 hours under dynamic vacuum for 12 hours. Sieves get bone dry and then we store our already dried solvents over them in the glovebox. But I guess that is just what we do since we do very air sensitive chemistry
Not sure as to whether this is the go-to in the States, but in Blighty, we used to find the Perrin textbook a terrific resource for drying organic and inorganic chemicals.
Vogel is pretty good too
When I needed ultra pure and dry MeCN for electrosynthesis in my PhD I double distilled it from permanganate first then P2O5.
Interesting
are you in the discord?
@@petevenuti7355 Should I be?
For THF distilleries, I guess one important thing apart from the drying itself is also the removal of the BHT stabilizer before use, which is present in most commercial THF.
that is true, but I find that it is pretty rare that the inhibitor is ever an issue
the boiling point of bht is 265 C. So it is not an issue if u are distelling
Great topic, I learned some things. On the industrial scale I designed and built a large THF mol sieve column. Regeneration was a beast due to the ceramic nature of mol sieves. - those things heat up and cool down sloooowly. That was not one of my favorite processes - flaring hot THF/N2 gas - yikes. An additional property of hyper dry solvents is the electrical conductivity. On the large scale this becomes an issue. "Wet" solvents quickly dissipate electrical charges acquired by pumping and flowing through pipes. Dry solvent stay charged up and can create discharges. Discharges are not good in large scale solvent systems. Inert atmospheres help managed the hazard but you'd rather not have a solvent tank behaving as a giant capacitor. People have reported looking into large tanks and seeing glowing sort of like the aurora borealis. The known incidents tend to occur when solvent is transferred and hoses are connected/disconnected. One solvent supplier had a recommendation to hang grounding elements inside the tank to collect this type of charge and dissipate it safely. Final story: When a mundane solvent like hexane or heptane is shipped from Houston TX to anywhere north the solvent will cool off, because anywhere north of Yewston is cooler. When the solvent cools water drops out of solution. It's not uncommon to receive a tanker load of solvent and collect a receipt sample and see people (at a Lithium plant) freak TF out because the sample is 99% water. Pro-tip: be prepared to collect, handle and discard some water in these situation.
Trying to tell another students supervisor who grew up using classical drying techniques such as Na/benzophenone that 3A sieves is better was quite an experience, can be hard to teach an old dog new tricks.
yep!!
I had the same experience when I showed my PI that paper
THF after sieves reacts with first portion LAH. THF after Na - not… Mb sieves make really anhydrous THF but sometimes we need something else)
Rigorously dry THF is best obtained by distilling the THF from molten potassium. The norm is to pre-dry over sieves, and then rigorously dry from K or Na/Bz. When using diethyl ether it is dried from NaK.
With Na/benzophenone, the benzophenone ketyl stays blue (i.e. rate of production of the ketyl at the surface of Na = rate of destruction of the ketyl) at several hundred ppm residual water once all oxygen is consumed (depending on the surface area of the Na). Blue only indicates O2 free, and not dry. The colour will deepen to purple as the rate of destruction of the ketyl goes down. In the Williams and Lawton paper, then tell us the THF was blue, and so it had not reached ultimate dryness.
A problem for all the "active hydrogen" desiccants (alkali metals, metal hydrides etc.) is that they release H2 gas, which K-F registers as lots of water. K-F readings of superdry solvents dried by these desiccants is much, much lower after degassing.
Interesting!
Usually heating mol sieves in the glass oven overnight isn't enough for me. What I do is to just put them in a Schlenk or Straus flask, put that in the microwave until I see the water vapour coming off, and then I let them dry in the vacuum until they're cold. Run this three or four times, and that usually does the deal.
In the literature there is a method for purifying acetone via cristallizing the complex with NaI, filtering the solid complex and distilling the acetone from it. Should produce quite pure and dry acetone. Maybe hard to scale, but for small amounts should work well. Didn't use it myself though.
Its helpful !! Love your video, which type of video is quite rare in our country.
Glad you liked it!
I LOVE molecular sieves, but MgSO4 is alright as well for basic applications.
yoo after almost all my reactions, I extract the organic layer, pump up and dry with MgSO4. then the dreadful column chromatography.
@@Jimbreh Exactly 🤣 it works well but it’s such a pain to completely remove and isolate from the product
@@Jimbreh sure, but there is a difference between getting rid of water for the column and drying solvents for organometallic chemistry
As long as you don't need to distill
@@Orchids.and.Endlers How do you filter? I usually use a medium glass frit with vacuum. Buchner funnel or gravity filtration is awful for removing MgSO4 (from experience)
In the (inorganic) lab I worked at, we stirred pre-dried (from a solvent purification machine) solvents over NaK Alloy and then distilled them. Also everyone told me that Acetonitrile destroys Molecular Sieves, which speaks for the chemistst beliefs in things that "somebody told them once or something" I guess.
Way more of the praxis of science that you would like to imagine works this way.
@@davidfetter re "somebody told them once or something"
NaOH seems to be a good example of that, at least outside of professional labs.
"Errmgrd don't open that bottle of lye without a full hazwopper suit, It's caustic and 'll melt yer arm!".
Likely stories passed down from old industry where they would do stupid stuff like dump [not pour] a 55galllon drum of lye into an open top water tank at chest level, (I've seen films documenting processes where they do this very thing.) and it was actually the heat of violently boiling water that was the real burn hazard, not the incidental lye solution.
Side note: I've used my bare fingers to handle small amounts of lye and even for stirring it into solution, it is not a big deal. Circumstance matters.
Often combinations of methods are useful: "Dry with method X and the just store over mol sieves until use."
I hate solvent stills, but that's probably because during my undergrad I was doing some reactions using tBuLi in the same hood as a big ether still. It really truly frightens me to think about how bad that could've gone. The benzophenone ketyl colors are really cool though
Even more fun when someone would throw a lump of potassium in and there would be this shiny melted blob of NaK bobbing around.
My brain short-circuited when u used methylene chloride instead of DCM
Lmao
You’re not alone lol 😂
This video reminded me that I need to tell my company's Karl Fischer group to remember to activate their molecular sieves
Good!
...huh. Never thought about drying mol sieves with a microwave. I need to look into that!
can confirm, works great
When I tested my analytically dry Dimethoxyethane it still decoloured the sodium benzophenone mixture even though it was stored over 3Å molsive and is supposed to have 2 ppm residual water so now I have been refluxing it over sodium for a further week in hope of drying it further
It might just have oxygen in it
@@That_Chemist I freeze pumped it before bringing it into the box where I added the sodium and benzophenone
Thank you YouTube recommendations
Yeah, acetone is a tricky one. It forms an addition compound with CaCl2 and MgSO4 doesn't work. Also due to aldol condensation the water content can increase so molecular sieves are no good either. I used freshly oven dried CaSO4, which seems to be the best option and distilled it directly from the desiccant. The literature claims 300 ppm or 0.002 M water with that procedure and that was good enough for my application.
I dry my acetone with molecular sieves, after usage I will microwave them so I get to reuse them. P2O5 or Anhydrous MgCl is just too expensive for us amateur and NaCl results aren't great
its pretty rare that you would need anhydrous acetone for amateur chemistry tho
@@That_Chemist That's true. I don't do too much water sensitive stuff
Tetraglyme is an absolute nightmare to dry, though some of the crown ethers would would likely be worse...
I still like to use potassium/sodium mirror whenever I can :D
I live in south I'm Bama an humidity is oppressive an it's really hard to keep chems an drying agents dry I found maxi pads an puppy pee pads work well to keep things dry
Amazing
For industrial use set a water spec for your reaction based on lab experiments. Do a K-F, if it does not fairy Chuck the solvent away. But I have set water specs for a manufacturer and then everything was ok.
Interesting that with dioxane that sodium got the solvent drier than sodium-potassium alloy, which I thought was a whole lot more reactive to water.
Also, I think when talking about ppm it's useful to think about percentages to get a bigger picture view. Eg 50 ppm on this list isn't that dry but that is still 0.05% water, making your solvent 99.95%. In 100 g of solvent, you only have 0.005 ml of water.
*50ppm = 0.005%
When I finally found the paper you get your data from a couple years ago, I was really excited. So how hot do you keep your glassware oven? Mine is usually around 110-120 C
I've flame dried my sieves under vacuum (what I was told in grad school by older labmates)
I think its like ~130ish but I'm not 100% sure
Try azeotropes especially with toluene
What about pyridine? Pyridine is a solvent, right?
However, mesityl oxide apparently smells good. So that's nice.
Best way to dry hydrocarbon solvent is reflux and partial distillation with sodium metal and place in inert air bottle with some suitable molecule sieve.
But this way is very tedious and boring works to do. And it doesn't work on protic solvent, above hydrocarbon substituted some halide (e.g. chloroform) because sodium reacts with the hydrogen of solvent and ruins them all.
So better way I feel is buy the solvent with air-seal, which can be bought from sigma-aldrich, or place the solvent in glove-box as soon as you get.
And use it all ASAP whenever you get. Don't buy big drum of solvent even if it's cheaper than small one, and you use it within 3 months at least.
but the question is *how does Aldrich dry their solvent*?
@@That_Chemist I'm in lab so I don't know the whole treatment the aldrich does.
But in the experiment scale, most of moisture problem was came from old stored solvent, or the someone who doesn't know his reaction and believe the undesired situation in the reaction originated from moisture of solvents.
I was taught to activate molecular sieves by heating at 200 deg C under vacuum, is that overkill?
That is overkill, but it is ok
I'm curious about diethyl ether, wasn't covered in the reference.
I typically use 4A mol sieves for diethyl ether
But only when the ether needs to be dry - usually I just use the ether straight from the supplier bottle
@@That_Chemist Thanks. Was thinking in reference to Grignard reactions.
@@johnathancorgan3994 In my lab we have an alumina column set up
@@That_Chemist This is my experience too. The Sureseal bottles of supplier dry solvents are fine for organometallics such as Grignards and alkyllithiums. Most of the lab fires I've heard of are related to solvents stills which is why they were removed from our labs.
it would have been nice if you had warned the audience, that HMPA is to be avoided at all costs because its highly cancerous. like with the hepafluoroisopropanol for females. it would help young chemists and other scientist to be aware of the dangers of certain substances.
thank you for your work in highly infomativ videos !
wow, i didnt expect wet toluene to have double the water content compared to wet THF.
I know that there is information on esters when their characterized on the infrared spectrometer, but is it even useful? The peaks are within the fingerprint region, so is it even worth bothering to verfiy the esters using the IR data in a lab setting?
if it is for library recognition then yes, but typically the only time I would use IR for organic stuff is when my stuff is insoluble, I have literally no idea what it is, or if a reviewer asked for it lol
@JohnWL - 2022-05-25
An easy way to test if your 3A sieves are activated is by placing a few in your hand and running a few mL of cool water over them. If the sieves get real hot they're sucking up water and good to go. I don't think I've ever gotten a new batch that needed to be activated. Tested solvents after with KF titrator to check in the past too.
@That_Chemist - 2022-05-25
interesting to know that they come activated
@JohnWL - 2022-05-25
@@That_Chemist could just be certain brands or batches? We only had to buy a few over my PhD since we regenerated most of them so they lasted a really long time.
@robertlapointe4093 - 2022-05-26
The same test with well dried silica produces a sort of rice crispies effect, as the spheres decrepitate forcefully.
@uiucchemistry2664 - 2022-05-31
Super helpful & practical tip. Thanks for this advice! I never thought of that haha
@FerociousPancake888 - 2022-12-16
Used them for the first time the other day and went to put the container away some time later and it was surprisingly hot!